Publications
2018
Joel H. Nitta, Saad Amer, and Charles C. Davis. 2018. “Microsorum× Tohieaense (Polypodiaceae), a New Hybrid Fern from French Polynesia, With Implications for the Taxonomy of Microsorum”. Systematic Botany, 43, 2, Pp. 397-413
Joel H. Nitta, Saad Amer, and Charles C. Davis. 2018. “Microsorum× Tohieaense (Polypodiaceae), a New Hybrid Fern from French Polynesia, With Implications for the Taxonomy of Microsorum”. Systematic Botany, 43, 2, Pp. 397-413
Andrea S. Meseguer, Jorge M. Lobo, Josselin Cornualt, Davis Beerling, Brad R. Ruhfel, Charles C. Davis, Emmanuelle Jousellin, and Isabel Sanmartin. 2018. “Reconstructing Deep‐time Palaeoclimate Legacies in the Clusioid Malpighiales Unveils Their Role in the Evolution and Extinction of the Boreotropical Flora”. Global Ecology and Biogeography, 27, 5, Pp. 616-28
Andrea S. Meseguer, Jorge M. Lobo, Josselin Cornualt, Davis Beerling, Brad R. Ruhfel, Charles C. Davis, Emmanuelle Jousellin, and Isabel Sanmartin. 2018. “Reconstructing Deep‐time Palaeoclimate Legacies in the Clusioid Malpighiales Unveils Their Role in the Evolution and Extinction of the Boreotropical Flora”. Global Ecology and Biogeography, 27, 5, Pp. 616-28
2017
William D. Pearse, Charles D. Davis, David W. Inouye, RIchard B. Primack, and T. Jonathan Davies. 2017. “A Statistical Estimator for Determining the Limits of Contemporary and Historic Phenology”. Nature, Ecology & Evolution
William D. Pearse, Charles D. Davis, David W. Inouye, RIchard B. Primack, and T. Jonathan Davies. 2017. “A Statistical Estimator for Determining the Limits of Contemporary and Historic Phenology”. Nature, Ecology & Evolution
Barnabas Daru, Daniel S. Park, Richard Primack, Charles G. Willis, David S. Barrington, Timothy J. S. Whitfeld, Tristram G. Seidler, Patrick W. Sweeny, David R. Foster, Arron M. Ellison, and Charles C. Davis. 2017. “Widespread Sampling Biases in Herbaria Revealed from Large-Scale Digitization”. BioRxiv
Barnabas Daru, Daniel S. Park, Richard Primack, Charles G. Willis, David S. Barrington, Timothy J. S. Whitfeld, Tristram G. Seidler, Patrick W. Sweeny, David R. Foster, Arron M. Ellison, and Charles C. Davis. 2017. “Widespread Sampling Biases in Herbaria Revealed from Large-Scale Digitization”. BioRxiv
Laura P. Lagomarsino, Elisabeth J. Forrestel, Nathan Muchhala, and Charles C. Davis. 2017. “Repeated Evolution of Vertebrate Pollination Syndromes in a Recently Diverged Andean Plant Clade”. Journal of Biogeography, 71, Pp. 1970-85
Laura P. Lagomarsino, Elisabeth J. Forrestel, Nathan Muchhala, and Charles C. Davis. 2017. “Repeated Evolution of Vertebrate Pollination Syndromes in a Recently Diverged Andean Plant Clade”. Journal of Biogeography, 71, Pp. 1970-85
Williams. Alex C., Joslin Goh, Charlie G. Willis, Aaron M. Ellison, James H. Brusuelas, Charles C. Davis, and Edith Law. 2017. “Deja Vu: Characterizing Worker Reliability Using Task Consistency”. In Association for the Advancement of Artificial IntelligenceI Conference on Human Computation and Crowdsourcing . Québec City, Québec, Canada: The AAAI Press, Palo Alto, California
Williams. Alex C., Joslin Goh, Charlie G. Willis, Aaron M. Ellison, James H. Brusuelas, Charles C. Davis, and Edith Law. 2017. “Deja Vu: Characterizing Worker Reliability Using Task Consistency”. In Association for the Advancement of Artificial IntelligenceI Conference on Human Computation and Crowdsourcing . Québec City, Québec, Canada: The AAAI Press, Palo Alto, California
Daniel S. Park and Charles C. Davis. 2017. “Implications and Alternatives of Assigning Climate Data to Geographical Centroids”. Journal of Biogeography , Pp. 1-11
Daniel S. Park and Charles C. Davis. 2017. “Implications and Alternatives of Assigning Climate Data to Geographical Centroids”. Journal of Biogeography , Pp. 1-11
Charles G. Willis, Edith Law, Williams. Alex C., Brian F. Franzone, Rebecca Bernados, Lian Bruno, Claire Hopkins, Christian Schorn, Ella Weber, Daniel S. Park, and Charles C. Davis. 2017. “CrowdCurio: An Online Crowdsourcing Platform to Facilitate Climate Change Studies Using Herbarium Specimens”. New Phytologist, 215, Pp. 479–488
Charles G. Willis, Edith Law, Williams. Alex C., Brian F. Franzone, Rebecca Bernados, Lian Bruno, Claire Hopkins, Christian Schorn, Ella Weber, Daniel S. Park, and Charles C. Davis. 2017. “CrowdCurio: An Online Crowdsourcing Platform to Facilitate Climate Change Studies Using Herbarium Specimens”. New Phytologist, 215, Pp. 479–488
Andrea Sanchez Meseguer, Jorge Lobo, Joselin Cornuault, David Beerling, Brad R. Ruhfel, Charles C. Davis, Emmanuelle Jousselin, and Isabel Sanmartin. 2017. “Reconstructing Deep-Time Paleoclimate Legacies Unveil the Demise and Turnover of the Ancient (boreo) Tropical Flora”. BioRxiv
Andrea Sanchez Meseguer, Jorge Lobo, Joselin Cornuault, David Beerling, Brad R. Ruhfel, Charles C. Davis, Emmanuelle Jousselin, and Isabel Sanmartin. 2017. “Reconstructing Deep-Time Paleoclimate Legacies Unveil the Demise and Turnover of the Ancient (boreo) Tropical Flora”. BioRxiv
Emily K. Meineke, Charles C. Davis, and Jonathan T. Davies. 2017. “Running Head: Herbaria for Understanding Global Change”. BioRxiv
Emily K. Meineke, Charles C. Davis, and Jonathan T. Davies. 2017. “Running Head: Herbaria for Understanding Global Change”. BioRxiv
Charles G. Willis, Elizabeth R. Ellwood, RIchard B. Primack, Charles C. Davis, Pearson Katelin D, Amanda S. Gallinat, Jenn M. Yost, Gil Neson, Susan J. Mazer, Natalie L. Rossington, Tim H. Sparks, and Pamela S. Soltis. 2017. “Old Plants, New Tricks: Phenological Research Using Herbarium Specimens”. Trends in Ecology & Evolution , 32, Pp. 531-46
Charles G. Willis, Elizabeth R. Ellwood, RIchard B. Primack, Charles C. Davis, Pearson Katelin D, Amanda S. Gallinat, Jenn M. Yost, Gil Neson, Susan J. Mazer, Natalie L. Rossington, Tim H. Sparks, and Pamela S. Soltis. 2017. “Old Plants, New Tricks: Phenological Research Using Herbarium Specimens”. Trends in Ecology & Evolution , 32, Pp. 531-46
Todd J. Barkman, R. Kloster Matthew, Keith D. Gaddis, Brian Franzone, Sondra Calhoun, Sugumaran Manickam, Suyanee Vessabutr, Sawitree Sasirat, and Charles C. Davis. 2017. “Reading Between the Vines: Hosts As Islands for Extreme Holoparasitic Plants”. American Journal of Botany, 104, 9, Pp. 1382-89
Todd J. Barkman, R. Kloster Matthew, Keith D. Gaddis, Brian Franzone, Sondra Calhoun, Sugumaran Manickam, Suyanee Vessabutr, Sawitree Sasirat, and Charles C. Davis. 2017. “Reading Between the Vines: Hosts As Islands for Extreme Holoparasitic Plants”. American Journal of Botany, 104, 9, Pp. 1382-89
Daniel S. Park, Aaron M. Ellison, and Charles C. Davis. 2017. “Selfing Species Exhibit Diminished Niche Breadth over Time”. BioRxiv
Daniel S. Park, Aaron M. Ellison, and Charles C. Davis. 2017. “Selfing Species Exhibit Diminished Niche Breadth over Time”. BioRxiv
2016
Bardon, Cynthia Sothers, Ghillean T. Prance, Pierre-Jean G. Malé, Zhenxiang Xi, Charles C. Davis, Jerome Murienne, García-Villacorta Roosevelt, Eric Coissac, Sébastien Lavergne, and Jérôme Chave. 2016. “Unraveling the Biogeographical History of Chrysobalanceae from Plastid Genomes”. American Journal of Botany , 103, 6, Pp. 1-14
Bardon, Cynthia Sothers, Ghillean T. Prance, Pierre-Jean G. Malé, Zhenxiang Xi, Charles C. Davis, Jerome Murienne, García-Villacorta Roosevelt, Eric Coissac, Sébastien Lavergne, and Jérôme Chave. 2016. “Unraveling the Biogeographical History of Chrysobalanceae from Plastid Genomes”. American Journal of Botany , 103, 6, Pp. 1-14
Laura P. Lagomarsino, Fabian L. Condamine, Alexandre Antonelli, Andreas Mulch, and Charles C. Davis. 2016. “The Abiotic and Biotic Drivers of Rapid Diversification in Andean Bellflowers (Campanulaceae)”. New Phytologist, 210, 4, Pp. 1430-42
Laura P. Lagomarsino, Fabian L. Condamine, Alexandre Antonelli, Andreas Mulch, and Charles C. Davis. 2016. “The Abiotic and Biotic Drivers of Rapid Diversification in Andean Bellflowers (Campanulaceae)”. New Phytologist, 210, 4, Pp. 1430-42
Brad R. Ruhfel, Claudia P. Bove, C. Thomas Philbrick, and Charles C. Davis. 2016. “Dispersal Largely Explains the Gondwanan Distribution of the Ancient Tropical Clusioid Plant Clade”. American Journal of Botany , 103, 6, Pp. 1-12
Brad R. Ruhfel, Claudia P. Bove, C. Thomas Philbrick, and Charles C. Davis. 2016. “Dispersal Largely Explains the Gondwanan Distribution of the Ancient Tropical Clusioid Plant Clade”. American Journal of Botany , 103, 6, Pp. 1-12
Liming Cai, Zhenxiang Xi, Kylee PEterson, Katherine Rushworth, Jeremy Beaulieu, and Charles C. Davis. 2016. “Phylogeny of Elatinaceae and the Tropical Gondwanan Origin of the Centroplacaceae (Malpighiaceae,Elatinaceae) Clade”. PLoS ONE, 11, 9, Pp. 1-21
Liming Cai, Zhenxiang Xi, Kylee PEterson, Katherine Rushworth, Jeremy Beaulieu, and Charles C. Davis. 2016. “Phylogeny of Elatinaceae and the Tropical Gondwanan Origin of the Centroplacaceae (Malpighiaceae,Elatinaceae) Clade”. PLoS ONE, 11, 9, Pp. 1-21
Joel H. Nitta, Jean-Yves Meyer, Ravahere Taputuarai, and Charles C. Davis. 2016. “Life Cycle Matters: DNA Barcoding Reveals Contrasting Community Structure Between Fern Sporophytes and Gametophytes”. Ecological Monographs , 87, 2, Pp. 278-96
Joel H. Nitta, Jean-Yves Meyer, Ravahere Taputuarai, and Charles C. Davis. 2016. “Life Cycle Matters: DNA Barcoding Reveals Contrasting Community Structure Between Fern Sporophytes and Gametophytes”. Ecological Monographs , 87, 2, Pp. 278-96
Whenheng Zhang, Elena M. Kramer, and Charles C. Davis. 2016. “Differential Expression of CYC2 Genes and the Elaboration of Floral Morphologies in Hiptage, an Old-World Genus of Malpighiaceae”. International Journal of Plant Sciences, 177, 7, Pp. 551-58
Whenheng Zhang, Elena M. Kramer, and Charles C. Davis. 2016. “Differential Expression of CYC2 Genes and the Elaboration of Floral Morphologies in Hiptage, an Old-World Genus of Malpighiaceae”. International Journal of Plant Sciences, 177, 7, Pp. 551-58
Goia M. Lyra, Carlos F. D. Gurgel, Emanuelle S. Costa, Priscilla B. Jesus, Mariana C. Oliveira, Eurico C. Oliveira, Charles C. Davis, and Jose M. Castro Nunes. 2016. “Delimitating Cryptic Species in the Gracilaria Domingensis Complex (Gracilariaceae, Rhodophyta) Using Molecular and Morphological Data”. Journal of Phycology , 52, Pp. 997-1017
Goia M. Lyra, Carlos F. D. Gurgel, Emanuelle S. Costa, Priscilla B. Jesus, Mariana C. Oliveira, Eurico C. Oliveira, Charles C. Davis, and Jose M. Castro Nunes. 2016. “Delimitating Cryptic Species in the Gracilaria Domingensis Complex (Gracilariaceae, Rhodophyta) Using Molecular and Morphological Data”. Journal of Phycology , 52, Pp. 997-1017
2015
Liang Liu, Zhenxiang Xi, Shaoyuan Wu, Charles C. Davis, and Scott V. Edwards. 2015. “Estimating Phylogenetic Trees from Genome-Scale Data”. Annals of the New York Academy of Sciences, 1360, Pp. 36-53
Liang Liu, Zhenxiang Xi, Shaoyuan Wu, Charles C. Davis, and Scott V. Edwards. 2015. “Estimating Phylogenetic Trees from Genome-Scale Data”. Annals of the New York Academy of Sciences, 1360, Pp. 36-53
Charles C. Davis, Charles G. Willis, Bryan Connolly, Courtland Kelly, and Aaron M. Ellison. 2015. “Herbarium Records Are Reliable Sources of Phenological Change Driven by Climate and Provide Novel Insights into Species’ Phenological Cueing Mechanisms”. American Journal of Botany, 102, 10, Pp. 1599-609
Charles C. Davis, Charles G. Willis, Bryan Connolly, Courtland Kelly, and Aaron M. Ellison. 2015. “Herbarium Records Are Reliable Sources of Phenological Change Driven by Climate and Provide Novel Insights into Species’ Phenological Cueing Mechanisms”. American Journal of Botany, 102, 10, Pp. 1599-609
Scott V. Edwards, Zhenxiang Xi, Axel Janke, Faircloth Brant C, John E. McCormack, Travis C. Glenn, Bojian Zhong, Shaoyuan Wu, Emily Moriarty Lemmon, Alan R. Lemmon, Adam D. Leaché, Liang Liu, and Charles C. Davis. 2015. “Implementing and Testing the Multispecies Coalescent Model: A Valuable Paradigm for Phylogenomics”. Molecular Phylogenetics and Evolution , 94, 2016, Pp. 447-62
Scott V. Edwards, Zhenxiang Xi, Axel Janke, Faircloth Brant C, John E. McCormack, Travis C. Glenn, Bojian Zhong, Shaoyuan Wu, Emily Moriarty Lemmon, Alan R. Lemmon, Adam D. Leaché, Liang Liu, and Charles C. Davis. 2015. “Implementing and Testing the Multispecies Coalescent Model: A Valuable Paradigm for Phylogenomics”. Molecular Phylogenetics and Evolution , 94, 2016, Pp. 447-62
Charles C. Davis and Aaron M. Ellison. 2015. “Opinion: Pope Francis’ Environmental Encyclical Cannot Be Ignored”. The Seattle Times
Charles C. Davis and Aaron M. Ellison. 2015. “Opinion: Pope Francis’ Environmental Encyclical Cannot Be Ignored”. The Seattle Times
Charles C. Davis and Zhenxiang Xi. 2015. “Horizontal Gene Transfer in Parasitic Plants”. Current Opinion in Plant Biology, 26, Pp. 14-19
Charles C. Davis and Zhenxiang Xi. 2015. “Horizontal Gene Transfer in Parasitic Plants”. Current Opinion in Plant Biology, 26, Pp. 14-19
Carl Veller, Martin A. Nowak, and Charles C. Davis. 2015. “Extended Flowering Intervals of Bamboos Evolved by Discrete Multiplication”. Ecology Letters, 18, Pp. 653-9
Carl Veller, Martin A. Nowak, and Charles C. Davis. 2015. “Extended Flowering Intervals of Bamboos Evolved by Discrete Multiplication”. Ecology Letters, 18, Pp. 653-9
Charlie G. Willis and Charles C. Davis. 2015. “Rethinking Migration”. Science, 348, 6236, Pp. 766
Charlie G. Willis and Charles C. Davis. 2015. “Rethinking Migration”. Science, 348, 6236, Pp. 766
Goia M. Lyra, Emmanuelle S. Costa, Priscilla Jesus, Joao Carlos Matos, Taiara A. Caires, Mariana C. Oliveira, Eurico C. Oliveira, Zhenxiang Xi, Jose Marcos C. Nunes, and Charles C. Davis. 2015. “Phylogeny of Gracilariaceae (Rhodophyta): Evidence from Plastid and Mitochondrial Nucleotide Sequences”. Journal of Phycology, 51, Pp. 356-66
Goia M. Lyra, Emmanuelle S. Costa, Priscilla Jesus, Joao Carlos Matos, Taiara A. Caires, Mariana C. Oliveira, Eurico C. Oliveira, Zhenxiang Xi, Jose Marcos C. Nunes, and Charles C. Davis. 2015. “Phylogeny of Gracilariaceae (Rhodophyta): Evidence from Plastid and Mitochondrial Nucleotide Sequences”. Journal of Phycology, 51, Pp. 356-66
Zhenxiang Xi, Liang Liu, and Charles C. Davis. 2015. “The Impact of Missing Data on Species Tree Estimation”. Molecular Biology and Evolution, 33, 3, Pp. 838-60
Zhenxiang Xi, Liang Liu, and Charles C. Davis. 2015. “The Impact of Missing Data on Species Tree Estimation”. Molecular Biology and Evolution, 33, 3, Pp. 838-60
Zhenxiang Xi, Liang Liu, and Charles C. Davis. 2015. “Genes With Minimal Phylogenetic Information Are Problematic for Coalescent Analyses When Gene Tree Estimation Is Biased”. Molecular Phylogenetics and Evolution, 92, Pp. 63-71
Zhenxiang Xi, Liang Liu, and Charles C. Davis. 2015. “Genes With Minimal Phylogenetic Information Are Problematic for Coalescent Analyses When Gene Tree Estimation Is Biased”. Molecular Phylogenetics and Evolution, 92, Pp. 63-71